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Fig. 2 | Journal of Cheminformatics

Fig. 2

From: CineMol: a programmatically accessible direct-to-SVG 3D small molecule drawer

Fig. 2

The four depiction types and two fill styles supported by CineMol’s draw_molecule API. a Space-filling. b Ball-and-stick. c Tube. d Wireframe. The wireframe depiction only supports stroke color and stroke opacity changes and has no separate glossy style. A resolution of 100 and a scale factor of 10.0 was used to generate these images. Algorithm runtimes (cartoon/glossy): space-filling = 1.5 s/1.5 s; ball-and-stick = 1.9 s/1.9 s; tube = 3.4 s/3.4 s; wireframe = 1 ms/1 ms. File sizes (cartoon/glossy): space-filling = 65 kb/74 kb; ball-and-stick: 176 kb/206 kb; tube = 75 kb/93 kb; wireframe = 14 kb/14 kb. The SDF containing the penicillin G conformer used to generate these images was retrieved from PubChem [13]. Adobe Illustrator 2024 was used to compile the SVGs and generate the figure in PNG format

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