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Fig. 5 | Journal of Cheminformatics

Fig. 5

From: Advancements in biotransformation pathway prediction: enhancements, datasets, and novel functionalities in enviPath

Fig. 5

The depth adjustment process according to intermediate metabolites determined in the predicted pathway. Compounds A and C are present in both observed and predicted pathways, which allows compound B to be identified as an intermediate metabolite. It can be ignored and the depth-associated weight for scoring can be adjusted accordingly for compound C. Figure taken from our previous work [15]

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