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Table 1 Benchmark toxicity datasets, their statistics and origins

From: Fate-tox: fragment attention transformer for E(3)-equivariant multi-organ toxicity prediction

Task

BBBP

SIDER

ClinTox

DILI

Skin Rxn

Carcinogens

hERG

Binary classification

Origin

Moleculenet

TDC

Num. of tasks

1

27

2

1

1

1

1

Recovered

2039 (99.85%)

1427 (97.20%)

1478 (99.85%)

475 (100%)

403 (100%)

276 (100%)

643 (99.23%)

Train/val/test

1628/204/204

1109/139/139

1167/146/146

332/47/96

281/40/82

193/28/55

453/65/132

  1. “Recovered” represents the count of molecules successfully embedded as both graph structures and 3D conformers