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Table 3 Fragmentation weights on seven toxicity benchmark datasets

From: Fate-tox: fragment attention transformer for E(3)-equivariant multi-organ toxicity prediction

 

BRICS

Bemis-Murcko Scaffolds

Functional groups (RDKit)

BBBP

0.4

0.3

0.3

SIDER

0.3

0.5

0.2

ClinTox

0.25

0.25

0.5

DILI

0.3

0.2

0.4

Carcinogens

0.4

0.2

0.4

Skin reaction

0.25

0.5

0.25

hERG

0.4

0.2

0.4

  1. Each weight represents the contribution of a specific fragmentation method used to achieve the results presented in Table 2. Highest values per dataset are marked in bold